The Big data tool for seabed Petrogeochemistry research-PetDB and its Application in Geoscience
Received date: 2013-08-26
Revised date: 2014-02-13
Online published: 2014-02-10
Copyright
PetDB is one of the most important basic databases in earth science and marine science. It is also the flagship for seabed petrogeochemical databases, which benefits marine geologists. PetDB combines nearly all the data of rocks from ocean floor, including petrological, mineralogical and geochemical data for rocks, glass, minerals and inclusions. For geochemical data it often contains the major elements, trace elements and isotopic ratios. The data in the database is integrated, well organized, easy for quiry and download. This quite popular and widely used database for petrology of ocean floor#cod#x02014;PetDB, which can be treated as a BigData tool in petrology, including the ideas to design the database, use instructions as well as its features, is introduced to domestic colleagues. It is well hoped that more and more petrogeochemists will pay more attention to and take interest in the database construction and BigData analysis, which is quite helpful in discussing new issues and performing scientific research.
Key words： PetDB; Ocean floor; Petrogeochemistry; BigData; Databases.
Xing YU . The Big data tool for seabed Petrogeochemistry research-PetDB and its Application in Geoscience[J]. Advances in Earth Science, 2014 , 29(2) : 306 -314 . DOI: 1001-8166(2014)02-0306-09
| [1] | Lynch C. Big data: How do your data grow?[J]. Nature, 2008, 455(7 209):28-29. |
| [2] | Mayer-Schnberger V, Cukier K. Big Data: A Revolution that Will Transform How We Live, Work, and Think[M]. Boston: Eamon Dolan/Houghton Mifflin Harcourt,2013. |
| [3] | Lohr S. The Age of Big Data[N/OL]. New York Times, 2012-02-11.[2013-12-29].. |
| [4] | Hey T,Tansley S,Tolle K. The Fourth Paradigm: Data-intensive Scientific Discovery[M]. Washington: Microsoft Research,2009. |
| [4] | [潘教峰,张晓林,译. 第四范式:数据密集型的科学发现[M]. 北京: 科学出版社, 2012.] |
| [5] | Lehnert K. The PetDB data collection: Impact on science[C]∥2007 GSA Denver Annual MeetingAbstracts. Colorado:Colorado Convention Center,2007. |
| [6] | Lehnert K, Su Y, Langmuir C H,et al. A global geochemical database structure for rocks[J]. Geochemistry, Geophysics, Geosystems, 2000, 1(1): 1012, doi:10.1029/1999GC000026. |
| [7] | Walker J D, Lehnert K A, Hofmann A W,et al. EarthChem: International Collaboration for Solid Earth Geochemistry in Geoinformatics[C].Florida Avenue, NW: AGU Fall Meeting 2005, 2005. |
| [8] | Sarbas B, Nohl U. The GEOROC database#cod#x02014;A decade of "online geochemistry"[J]. Geochimica et Cosmochimica Acta Supplement, 2009, 73:1 158. |
| [9] | Sarbas B, Nohl U, Busch U,et al. The geochemical database GEOROC#cod#x02014;What#cod#x02019;s the News[C]//Geophysical Research Abstracts. Vienna, Austria: European Geosciences Union 2006, 2006. |
| [10] | Schewe I. The PANGAEA Database-Get Order in Your Scientific Primary Data[C]. Carvoeiro: HERMES 3rd Annual Meeting,2008, 3: 4. |
| [11] | Schindler U, Diepenbroek M, Grobe H. PANGAEA#cod#x02014;Research data enters scholarly communication[C]∥EGU General Assembly Conference 2012,Abstracts. Vienna, Austria: EGU,2013,14: 13 378. |
| [12] | Ichiyama Y, Hanafusa Y, Soma S. The #cod#x0201c;GANSEKI#cod#x0201d; database of ocean-floor rock samples[J]. Journal of Geology Society Japan, 2011, 117(10):579-584. |
| [12] | [市山祐司, 華房康憲, 相馬伸介. 深海底岩石試料データベース「GANSEKI」の紹介[J]. 地質学雑誌, 2011, 117(10):579-584.] |
| [13] | Spear F S, Hallett B, Pyle J M, et al. MetPetDB: A database for metamorphic geochemistry[J]. Geochemistry, Geophysics, Geosystems, 2009, 10(12): Q12005,doi: 10.1029/2009GC002766. |
| [14] | Walker J D, Bowers T D, Black R A, et al. A geochemical database for western North American volcanic and intrusive rocks (NAVDAT)[J]. Special Papers-Geological Society of America, 2006,397:61. |
| [15] | Carlson R W, Walker D, Black R,et al. NAVDAT#cod#x02014;A western north american volcanic and intrusive rock geochemical database[C]//GSA Annual Meeting Abstracts. Boston: Geological Society of America, 2001. |
| [16] | Saal A E, Hauri E H, Langmuir C H, et al. Vapour undersaturation in primitive mid-ocean-ridge basalt and the volatile content of Earth#cod#x02019;supper mantle[J]. Nature, 2002, 419(6 906):451-455. |
| [17] | Herzberg C, Asimow P D, Arndt N, et al. Temperatures in ambient mantle and plumes: Constraints from basalts,picrites, and komatiites[J]. Geochemistry, Geophysics, Geosystems, 2007,8(2): Q02006,doi:10.1029GC001390. |
| [18] | Salters V J, Stracke A. Composition of the depleted mantle[J]. Geochemistry, Geophysics, Geosystems, 2004, 5(5): Q05B07,doi: 10.1029/2003GC000597. |
| [19] | Thirlwall M F, Gee M, Taylor R N, et al. Mantle components in Iceland and adjacent ridges investigated using double-spike Pb isotope ratios[J]. Geochimica et Cosmochimica Acta,2004, 68(2):361-386. |
| [20] | Weyer S, M#cod#x000fc;nker C, Mezger K. Nb/Ta, Zr/Hf and REE in the depleted mantle: Implications for the differentiation history of the crust-mantle system[J].Earth and Planetary Science Letters, 2003, 205(3):309-324. |
| [21] | Cipriani A, Brueckner H K, Bonatti E,et al. Oceanic crust generated by elusive parents: Sr and Nd isotopes in basalt-peridotite pairs fromthe Mid-Atlantic Ridge[J]. Geology, 2004, 32(8): 657-660. |
| [22] | Spiegelman M, Kelemen P B. Extreme chemical variability as a consequence of channelized melt transport[J]. Geochemistry, Geophysics, Geosystems, 2003, 4(7): 1 055, doi: 10.1029/2002GC000336. |
| [23] | van de Flierdt T, Frank M, Halliday A N, et al. Tracing the history of submarine hydrothermal inputs and the significance of hydrothermal hafnium for the seawater budget#cod#x02014;A combined Pb-Hf-Nd isotope approach[J]. Earth and Planetary Science Letters, 2004, 222(1):259-273. |
| [24] | Yamagishi Y, Katsuhiko S, Hajimu T, et al. Visualization of geochemical data for rocks and sediments in Google Earth: Development of a data converter application for geochemical and isotopic data sets in database systems[J]. Geochemistry, Geophysics, Geosystems, 2011, 12(3): Q3016,doi: 10.1029/2010GC003490. |
| [25] | Rauch J N. Global distributions of Fe, Al, Cu, and Zn contained in Earth#cod#x02019;s derma layers[J]. Journal of Geochemical Exploration, 2011,110(2):193-201. |
| [26] | Rubin K H, Sinton J M. Inferences on mid-ocean ridge thermal and magmatic structure from MORB compositions[J]. Earth and Planetary Science Letters, 2007,260(1/2):257-276. |
| [27] | Class C, Goldstein S L. Evolution of helium isotopes in the Earth#cod#x02019;s mantle[J]. Nature, 2005,436(7 054):1107-1112. |
| [28] | Ballentine C J, Marty B, Sherwood Lollar B, et al. Neon isotopes constrain convection and volatile origin in the Earth#cod#x02019;s mantle[J]. Nature, 2005,433(7 021):33-38. |
| [29] | Carbotte S M, Small C, Donnelly K. The influence of ridge migration on the magmatic segmentation of mid-ocean ridges[J]. Nature, 2004, 429(6 993):743-746. |
| [30] | Escart#cod#x000ed;n J, Smith D K, Cann J, et al. Central role of detachment faults in accretion of slow-spreading oceaniclithosphere[J]. Nature, 2008,455(7 214):790-794. |
| [31] | Sharp Z D, Barnes J D, Brearley A J, et al. Chlorine isotope homogeneity of the mantle, crust andcarbonaceous chondrites[J]. Nature,2007,446(7 139):1062-1065. |
| [32] | Wang Pinxian. Oceanography from inside the ocean[J]. Advances in Earth Science, 2013, 28(5): 517-520. |
| [32] | [汪品先. 从海洋内部研究海洋[J]. 地球科学进展, 2013, 28(5): 517-520.] |
| [33] | Yao Yupeng. Current workforce pattern of the geological basic research in China#cod#x02014;Based on the statistics of the proposals for the National Natural Science Foundation of China[J]. Advances in Earth Science, 2012, 27(5): 581-588. |
| [33] | [姚玉鹏. 地质学基础研究队伍现状#cod#x02014;#cod#x02014;根据国家自然科学基金申请格局的分析[J]. 地球科学进展, 2012, 27(5): 581-588.] |
| [34] | Ma Weifeng,Wang Xiaorui,Gao Shan. Geochemistry science database system for east China based on relational database and WebGIS[J].Earth Science#cod#x02014;Journal of China University of Geosciences, 2008, 33(3): 423-430. |
| [34] | [马维峰, 王晓蕊, 高山. 基于关系数据库和 WebGIS 的中国东部地球化学科学数据库[J]. 地球科学:中国地质大学学报, 2008, 33(3): 423-430.] |
| [35] | Shang Ruxiang, Zeng Guangyu, Li Dexing.Data base management system and application programs for the research of volcanic rocks[J]. Acta Petrologica et Mineralogica,1989,8(4):331-337. |
| [35] | [尚如相, 曾广瑜, 李德兴. 火山岩岩石化学, 地球化学数据库管理系统及应用程序[J]. 岩石矿物学杂志, 1989, 8(4):331-337.] |
| [36] | Shang Ruxiang. Development and present condition of the igneous database[J].Geological Review,1999, 45(7):26-32. |
| [36] | [尚如相.火成岩数据库的发展与现状[J]. 地质论评, 1999,45(7):26-32.] |
| [37] | Shi Changyi. Geochemical database and its application[J]. Geophysical & Geochemical Exploration, 2004, 28(5):382-387. |
| [37] | [史长义.地球化学数据库及其应用概况[J]. 物探与化探, 2004, 28(5):382-387.] |
| [38] | Xu Weichang, Wang Yaonan, Wang Ping, et al. Petrochemistry, mineral chemistry and geochemistry database for magmatic rocks from China[J]. Acta Petrologica sinica, 1991, (2):95. |
| [38] | [徐伟昌, 王耀南, 王平, 等.全国岩浆岩岩石化学、矿物化学及地球化学数据库[J]. 岩石学报, 1991, (2):95.] |
| [39] | Zhang Cong, Yu Bingsong, Mo Shaolong, et al. Design and development of rock sample library based on oracle[J]. Chinese Geological Education, 2012,21(2):56-59. |
| [39] | [张聪, 于炳松, 莫少龙, 等.基于 Oracle 的岩石标本数据库设计与实现[J]. 中国地质教育, 2012, 21(2):56-59.] |
| [40] | Zhao Qiren. We have built the world largest database for geochemical exploration[J]. Chemical Minerals, 2005, 27(2):117. |
| [40] | [赵其仁.我国建成世界最大规模地球化学勘查数据库[J]. 化工矿产地质, 2005, 27(2):117.] |
| [41] | Ma Jianwen, Qin Sixian. Recent advances and development of data assimilation algorithms[J]. Advances in Earth Science, 2012, 27(7): 747-757. |
| [41] | [马建文,秦思娴. 数据同化算法研究现状综述[J]. 地球科学进展, 2012, 27(7): 747-757.] |
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