[1] Didyk B M, Simoneit B R T, Brassell S C, et al. Organic geochemical indicators of palaeoenvironmental conditions of sedimentation[J].Nature,1978, 272(5 650): 216-222.
[2] Harris P G, Zhao M, Rosell-Mele A, et al. Chlorin accumulation rate as a proxy for Quaternary marine primary productivity[J]. Nature,1996, 383(6 595): 63-65.
[3] Hodgson D A, McMinn A, Kirkup H, et al. Colonization, succession, and extinction of marine floras during a glacial cycle: A case study from the Windmill islands (east Antarctica) using biomarkers[J].Paleoceanography,2003, 18(3):1 067.
[4] Zhang Jie, Jia Guodong. Application of plant-derived n-alkanes and their compound-specific hydrogen isotopic composition in paleoenvironment research[J].Advances in Earth Science, 2009,24(8): 874-881.[张杰, 贾国东. 植物正构烷烃及其单体氢同位素在古环境研究中的应用[J]. 地球科学进展, 2009,24(8): 874-881.]
[5] Bianchi T S, Allison M A. Large-river delta-front estuaries as natural “record ers” of global environmental change[J].Proceedings of the National Academy of Sciences of the USA,2009, 106(20): 8 085-8 092.
[6] Yao Peng, Yu Zhigang. Advances of intact polar membrane lipids as chemical biomarkers for extant microorganisms in marine sediments[J].Advances in Earth Science,2010, 25(5): 474-483.[姚鹏, 于志刚. 海洋沉积物中现存微生物化学标志物完整极性膜脂研究进展[J].地球科学进展, 2010,25(5): 474-483.][7] Meyers P A. Applications of organic geochemistry to paleolimnological reconstructions: A summary of examples from the Laurentian great lakes[J].Organic Geochemistry,2003, 34(2): 261-289.
[8] Leavitt P R, Hodgson D A. Sedimentary Pigments[M]//Soml J P, Birks H J, Last W M. Tracking Environmental Change Using Lake Sediments Volume 3. Dordrecht, Netherlands: Kluwer Academic, 2001: 295-325.
[9] King L L, Repeta D J. Novel pyropheophorbide steryl esters in Black sea sediments[J]. Geochimica et Cosmochimica Acta,1991, 55(7): 2 067-2 074.
[10] Goericke R, Shankle A M, Repeta D J. Novel carotenol chlorin esters in marine sediments and water column particulate matter[J].Geochimica et Cosmochimica Acta,1999, 63(18): 2 825-2 834.
[11] Chen N, Bianchi T S, Bland J M. Novel decomposition products of chlorophyll-a in continental shelf (Louisiana shelf) sediments: Formation and transformation of carotenol chlorin esters[J].Geochimica et Cosmochimica Acta,2003, 67(11): 2 027-2 042.
[12] Repeta D J. A high resolution historical record of Holocene anoxygenic primary production in the Black sea[J].Geochimica et Cosmochimica Acta,1993, 57(17): 4 337-4 342.
[13] Chen N, Bianchi T S, McKee B A,et al. Historical trends of hypoxia on the Louisiana shelf: Application of pigments as biomarkers[J].Organic Geochemistry, 2001, 32(4): 543-561.
[14] Bianchi T S, Engelhaupt E, McKee B A,et al. Do sediments from coastal sites accurately reflect time trends in water column phytoplankton? A test from Himmerfjarden bay (Baltic sea proper)[J].Limnology and Oceanography,2002, 47(5): 1 537-1 544.
[15] Bianchi T S, Rolff C, Widbom B, et al. Phytoplankton pigments in Baltic sea seston and sediments: Seasonal variability, fluxes, and transformations[J].Estuarine, Coastal and Shelf Science,2002, 55(3): 369-383.
[16] Bianchi T S, Findlay S, Dawson R. Organic matter sources in the water column and sediments of the Hudson river estuary: The use of plant pigments as tracers[J].Estuarine, Coastal and Shelf Science,1993, 36(4): 359-376.
[17] Bianchi T S, Lambert C D, Santschi P H, et al. Sources and transport of land-derived particulate and dissolved organic matter in the gulf of Mexico (Texas shelf/slope): The use of ligninphenols and loliolides as biomarkers[J].Organic Geochemistry,1997, 27(1/2): 65-78.
[18] Bianchi T S, Engelhaupt E, Westman P, et al. Cyanobacterial blooms in the Baltic sea: Natural or human-induced?[J]. Limnology and Oceanography,2000, 45(3): 716-726.
[19] Kowalewska G. Algal pigments in Baltic sediments as markers of ecosystem and climate changes[J].Climate Research,2001, 18(1/2): 89-96.
[20] Zhu Zhuoyi. Hypoxia in the Changjiang Estuary and Its Adjacent Area—Started with Phytoplankton Pigments[D]. Shanghai: East China Normal University, 2007.[朱卓毅. 长江口及邻近海域低氧现象的探讨——以光合色素为出发点[D]. 上海: 华东师范大学, 2007.]
[21] Jin Haiyan, Chen Jianfang, Weng Huanxin, et al. Variations of paleoproductivity in the past decades and the environmental implications in the Changjiang estuary in China[J].Acta Oceanologica Sinica,2009,31(2): 113-119.[金海燕, 陈建芳, 翁焕新, 等. 长江口外赤潮多发区近几十年来的古生产力记录及环境意义[J]. 海洋学报, 2009, 31(2): 113-119.]
[22] Scheer H. An overview of chlorophylls and bacteriochlorophylls: Biochemistry, biophysics, functions and applications[M]//Grimm B, Porra R J, Rudiger W,et al. Chlorophylls and Bacteriochlorophylls. Netherlands: Springer,2006: 1-26.
[23] Wright S, Jeffrey S. Pigment Markers for Phytoplankton Production[M]//Volkman J K. Marine Organic Matter. Berlin Heidelberg: Springer,2006: 71-104.
[24] Keely B J. Geochemistry of Chlorophylls[M]//Grimm B, Porra R J, Rudiger W, et al. Chlorophylls and Bacteriochlorophylls. Dordrecht: Springer,2006: 535-561.
[25] Rowan K S. Photosynthetic Pigments of Algae\[M\]. Cambridge. UK: Cambridge University Press, 1989.
[26] Bianchi T S, Findlay S. Plant pigments as tracers of emergent and submergent macrophytes from the Hudson river[J]. Canadian Journal of Fisheries and Aquatic Sciences, 1990, 47(3): 492-494.
[27] Brotas V, Plante-Cuny M R. The use of HPLC pigment analysis to study microphytobenthos communities[J].Acta Oecologica, 2003, 24(suppl.): S109-S115.
[28] Goericke R, Repeta D J. The pigments of prochlorococcus marinus: The presence of divinyl chlorophyll a and b in a marine prokaryote[J].Limnology and Oceanography,1992, 37(2): 425-433.
[29] Jeffrey S W, Hallegraeff G M. Chlorophyllase distribution in ten classes of phytoplankton: A problem for chlorophyll analysis[J].Marine Ecology Progress Series,1987, 35: 293-304.
[30] Bianchi T S, Findlay S, Fontvieille D. Experimental degradation of plant materials in Hudson river sediments[J]. Biogeochemistry,1991, 12(3): 171-187.
[31] Head E J H, Hargrave B T, Subba Rao D V. Accumulation of a pheophorbide a-like pigment in sediment traps during late stages of a spring bloom: A product of dying algae?[J].Limnology and Oceanography,1994, 39(1): 176-181.
[32] Chen N, Bianchi T S, Bland J M. Implications for the role of preversus post-depositional transformation of chlorophyll-a in the Lower Mississippi River and Louisiana shelf[J].Marine Chemistry,2003, 81(1/2): 37-55.
[33] Hodgson D A, Wright S W, Tyler P A,et al. Analysis of fossil pigments from algae and bacteria in meromictic Lake Fidler, Tasmania, and its application to lake management[J].Journal of Paleolimnology,1998, 19(1): 1-22.
[34] King L L, Repeta D J. Phorbin steryl esters in Black sea sediment traps and sediments: A preliminary evaluation of their paleooceanographic potential[J].Geochimica et Cosmochimica Acta,1994, 58(20): 4 389-4 399.
[35] Harradine P J, Harris P G, Head R N,et al. Steryl chlorin esters are formed by zooplankton herbivory[J].Geochimica et Cosmochimica Acta,1996, 60(12): 2 265-2 270.
[36] Jeffrey S W, Sielicki M, Haxo F T. Chloroplast pigment patterns in dinoflagellates[J].Journal of Phycology,1975, 11(4): 374-384.
[37] Heelis D V, Kernick W, Phillips G O,et al. Separation and identification of the carotenoid pigments of stigmata isolated from light-grown cells of Euglena gracilis strain Z[J].Archives of Microbiology,1979, 121(3): 207-211.
[38] Buffan-Dubau E, Carman K R. Extraction of benthic microalgal pigments for HPLC analyses[J].Marine Ecology Progress Series,2000, 204: 293-297.
[39] Lucas C H, Holligan P M. Nature and ecological implications of algal pigment diversity on the Molenplaat tidal flat (Westerschelde estuary, SW Netherlands)[J].Marine Ecology Progress Series,1999, 180: 51-64.
[40] Reuss N, Conley D J. Effects of sediment storage conditions on pigment analyses[J].Limnology and Oceanography: Methods, 2005, 3: 477-487.
[41] Wright S W, Jeffrey S W, Mantoura R F C. Evaluation of methods and solvents for pigment extraction[M]//Jeffrey S W, Mantoura R F C, Wright S W. Phytoplankton Pigments in Oceanography. Paris: UNESCO,1997: 261-282.
[42] Zhao J, Yao P, Yu Z,et al. Orthogonal design for optimization of pigment extraction from estuarine sediments[J].Submitted to Marine and Freshwater Research,2010(in press).
[43] Mantoura R F C, Jeffrey S W, Llewellyn C A, et al. Comparison between spectrophotometric, fluorometric and HPLC methods for chlorophyll analysis[M]//Jeffrey S W, Mantoura R F C, Wright S W. Phytoplankton Pigments in Oceanography. Paris: UNESCO, 1997: 361-380.
[44] Mantoura R F C, Llewellyn C A. The rapid determination of algal chlorophyll and carotenoid pigments and their breakdown products in natural waters by reverse-phase high-performance liquid chromatography[J].Analytica Chimica Acta,1983, 151: 297-314.
[45] Wright S W, Jeffrey S W, Mantoura R F C,et al. Improved HPLC method for the analysis of chlorophylls and carotenoids from marine phytoplankton[J].Marine Ecology Progress Series,1991, 77: 183-196.
[46] Zapata M, Rodriguez F, Garrido J L. Separation of chlorophylls and carotenoids from marine phytoplankton: A new HPLC method using a reversed phase C8 column and pyridine-containing mobile phases[J].Marine Ecology Progress Series,2000, 195: 29-45.
[47] Airs R L, Atkinson J E, Keely B J. Development and application of a high resolution liquid chromatographic method for the analysis of complex pigment distributions[J].Journal of Chromatography A,2001, 917(1/2): 167-177.
[48] Garrido J L, Zapata M. Chlorophyll Analysis by New High Performance Liquid Chromatography Methods[M]//Grimm B, Porra R J, Rudiger W,et al. Chlorophylls and Bacteriochlorophylls. Netherlands: Springer,2006: 109-121.
[49] Foppen F H. Tables for the identification of carotenoid pigments[J].Chromatographic Reviews,1971, 14(3): 133-298.
[50] Jeffrey S W, Mantoura R F C, Bjornland T. Data for the identification of 47 key phytoplankton pigments[M]//Jeffrey S W, Mantoura R F C, Wright S W. Phytoplankton Pigments in Oceanography. Paris: UNESCO,1997: 447-559.
[51] Leavitt P R. A review of factors that regulate carotenoid and chlorophyll deposition and fossil pigment abundance[J].Journal of Paleolimnology,1993, 9(2): 109-127.
[52] Sun M Y, Lee C, Aller R C. Laboratory studies of oxic and anoxic degradation of chlorophyll-a in Long Island Sound sediments[J].Geochimica et Cosmochimica Acta,1993, 57(1): 147-157.
[53] Repeta D J, Gagosian R B. Carotenoid diagenesis in recent marine sediments: I. The Peru continental shelf (15S, 75W)[J]. Geochimica et Cosmochimica Acta, 1987, 51(4): 1 001-1 009.
[54] Brown S B, Houghton J D, Hendry G A F. Chlorophyll Breakdown[M]//Scheer H. Chlorophylls. Boca Raton: CRC Press,1991: 465-489.
[55] Fietz S. Recent and Fossil Phytoplankton Pigments in Lake Baikal as Markers for Community Structure and Environmental Changes[D]. Berlin: Leibniz Institute of Freshwater Ecology and Inland Fisheries, 2005.
[56] Sun M Y, Lee C, Aller R C. Anoxic and oxic degradation of ¹⁴C-labeled chloropigments and a ¹⁴C-labeled diatom in Long Island Sound sediments[J].Limnology and Oceanography,1993, 38(7): 1 438-1 451.
[57] Daley R J. Experimental characterization of lacustrine chlorophyll diagenesis. II. Bacterial, viral and herbivore grazing effects[J]. Archive fur Hydrobiologie, 1973, 72: 409-439.
[58] Bianchi T S, Johansson B, Elmgren R. Breakdown of phytoplankton pigments in Baltic sediments: Effects of anoxia and loss of deposit-feeding macrofauna[J].Journal of Experimental Marine Biology and Ecology,2000, 251(2): 161-183.
[59] Sinninghe Damste J S, Koopmans M P. The fate of carotenoids in sediments: An overview[J].Pure and Applied Chemistry, 1997, 69(10): 2 067-2 074.
[60] Repeta D J. Carotenoid diagenesis in recent marine sediments: II. Degradation of fucoxanthin to loliolide[J].Geochimica et Cosmochimica Acta,1989, 53(3): 699-707.
[61] Menzel D, van Bergen P F, Schouten S,et al. Reconstruction of changes in export productivity during Pliocene sapropel deposition: A biomarker approach[J].Palaeogeography, Palaeoclimatology, Palaeoecology,2003, 190: 273-287.
[62] Canfield D E. Factors influencing organic carbon preservation in marine sediments[J].Chemical Geology,1994,114(3/4): 315-329.
[63] Yang Huiqun, Zhou Huaiyang, Ji Fuwu,et al. Bioturbation in seabed sediments and its effects on marine sedimentary processes and Records[J].Advances in Earth Science, 2008, 23(9): 932-941.[杨慧群, 周怀阳, 季福武, 等. 海底生物扰动作用及其对沉积过程和记录的影响[J]. 地球科学进展, 2008, 23(9): 932-941.]
[64] Rabalais N N, Atilla N, Normandeau C, et al. Ecosystem history of Mississippi River-influenced continental shelf revealed through preserved phytoplankton pigments[J].Marine Pollution Bulletin,2004, 49(7/8): 537-547.
[65] Reuss N, Conley D J, Bianchi T S. Preservation conditions and the use of sediment pigments as a tool for recent ecological reconstruction in four Northern European estuaries[J].Marine Chemistry,2005, 95(3/4): 283-302.
[66] Savage C, Leavitt P R, Elmgren R. Effects of land use, urbanization, and climate variability on coastal eutrophication in the Baltic Sea[J].Limnology and Oceanography,2010,55(3): 1 033-1 046.
[67] Wysocki L A, Bianchi T S, Powell R T, et al. Spatial variability in the coupling of organic carbon, nutrients, and phytoplankton pigments in surface waters and sediments of the Mississippi river plume[J].Estuarine, Coastal and Shelf Science,2006, 69(1/2): 47-63.
[68] Sun M Y, Aller R C, Lee C. Early diagenesis of chlorophyll-a in Long Island Sound sediments: A measure of carbon flux and particle reworking[J].Journal of Marine Research,1991, 49(2): 379-401.
[69] Chen N, Bianchi T S, McKee B A. Early diagenesis of chloropigment biomarkers in the lower Mississippi River and Louisiana shelf: Implications for carbon cycling in a river-dominated margin[J].Marine Chemistry, 2005, 93(2/4): 159-177.
[70] Szymczak-Zyla M, Kowalewska G. Chloropigments a in the Gulf of Gdansk (Baltic Sea) as markers of the state of this environment[J].Marine Pollution Bulletin,2007, 55(10/12): 512-528.
[71] Repeta D J, Simpson D J, Jorgensen B B,et al. Evidence for anoxygenic photosynthesis from the distribution of bacteriochlorophylls in the Black Sea[J].Nature,1989, 342(6 245): 69-72.